STRINGSTRING
XCC3310 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3310" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3310annotation not available (261 aa)    
Predicted Functional Partners:
CAP52470.1
annotation not available (413 aa)
   
          0.688
xcc-b100_1236
Acetyltransferases, including N-acetylases of ribosomal proteins (635 aa)
   
          0.662
XCC0131
annotation not available (223 aa)
   
          0.650
XCC1115
annotation not available (643 aa)
   
          0.648
XCC3284
annotation not available (315 aa)
   
          0.637
XCC3409
Nisin-resistance protein; Periplasmic protease (456 aa)
   
          0.637
wxcO
Integral membrane protein (750 aa)
   
          0.599
XCC1138
annotation not available (351 aa)
   
          0.579
CAP51997.1
Uncharacterized protein containing caspase domain (329 aa)
   
          0.555
CAP51996.1
annotation not available (102 aa)
   
          0.533
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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