STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3287Uncharacterized protein; Membrane-associated phospholipid phosphatase (693 aa)    
Predicted Functional Partners:
XCC1009
Uncharacterized protein; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
 
   
 0.766
XCC3899
annotation not available
  
     0.752
XCC1742
annotation not available
  
     0.748
XCC0013
Uncharacterized protein
  
     0.727
XCC2267
annotation not available
 
  
 0.725
XCC4084
Uncharacterized protein conserved in bacteria
  
  
 0.725
XCC0848
annotation not available
  
     0.716
XCC2656
annotation not available
  
     0.703
XCC2192
annotation not available
  
     0.700
XCC3848
annotation not available
  
     0.698
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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