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fepA protein (Xanthomonas campestris campestris) - STRING interaction network
"fepA" - TonB-dependent receptor in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fepATonB-dependent receptor; Predicted hydrolase (HAD superfamily) (763 aa)    
Predicted Functional Partners:
lao
Flavin monoamine oxidase-related protein; Monoamine oxidase (402 aa)
 
          0.773
CAP50252.1
Monoamine oxidase (134 aa)
 
          0.748
tdcF
TdcF protein; Putative translation initiation inhibitor yjgF family (167 aa)
 
          0.710
XCC2572
Outer membrane receptor proteins mostly Fe transport (996 aa)
   
        0.709
XCC3277
Cytochrome c mono- and diheme variants (141 aa)
 
          0.644
tonB
Periplasmic protein TonB, links inner and outer membranes (224 aa)
 
 
 
  0.619
fecR
Fe2+-dicitrate sensor, membrane component (341 aa)
 
 
  0.612
CAP51862.1
Signal transduction kinase (515 aa)
   
          0.577
XCC3075
annotation not available (388 aa)
   
          0.572
XCC1496
annotation not available (177 aa)
   
          0.548
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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