STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azuAzurin; Transfers electrons from cytochrome c551 to cytochrome oxidase (175 aa)    
Predicted Functional Partners:
XCC3277
Cytochrome c mono- and diheme variants
 
   
 0.762
hisC2
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
       0.598
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
      
 0.542
tdcF
TdcF protein; Putative translation initiation inhibitor yjgF family
       0.533
CAP50252.1
Monoamine oxidase
       0.511
lao
Flavin monoamine oxidase-related protein; Monoamine oxidase
       0.511
XCC3476
Surface antigen protein
    
 
 0.496
XCC2116
annotation not available
    
 
 0.496
XCC1752
Cellulase; Uncharacterized protein related to plant photosystem II stability/assembly factor
    
 
 0.496
XCC2036
Hydroxylase; Predicted nucleoside-diphosphate-sugar epimerases
      
 0.482
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (11%) [HD]