STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3256annotation not available (114 aa)    
Predicted Functional Partners:
XCC3255
annotation not available
 
     0.974
XCC2919
Chemotaxis signal transduction protein
  
     0.747
XCC0211
annotation not available
  
     0.680
XCC0193
annotation not available
  
     0.669
XCC2656
annotation not available
  
     0.668
XCC2390
annotation not available
  
     0.659
XCC0490
Cobalamin biosynthesis protein CobD/CbiB
  
     0.655
XCC2792
annotation not available
  
     0.653
XCC2431
annotation not available
  
     0.648
hemN
Oxygen-independent coproporphyrinogen-III oxidase-like protein; Involved in the biosynthesis of porphyrin-containing compound
       0.638
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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