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garD protein (Xanthomonas campestris campestris) - STRING interaction network
"garD" - Altronate dehydratase in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
garDAltronate dehydratase (514 aa)    
Predicted Functional Partners:
gudD
Glucarate hydratase; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family (451 aa)
 
 
  0.996
kdgD
Probable 5-dehydro-4-deoxyglucarate dehydratase; Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family (305 aa)
 
 
  0.985
garP
Glucarate transporter; Permeases of the major facilitator superfamily (454 aa)
 
   
  0.958
ttuB
MFS transporter; Permeases of the major facilitator superfamily (461 aa)
 
   
  0.837
fucP
Fucose permease (432 aa)
   
   
  0.814
gluP2
Glucose/galactose transporter; Fucose permease (436 aa)
   
   
  0.814
gluP1
Glucose/galactose transporter; Fucose permease (425 aa)
   
   
  0.803
XCC3241
annotation not available (423 aa)
 
          0.783
uxaC
Glucuronate isomerase (471 aa)
 
   
  0.686
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; Belongs to the KduI family (284 aa)
 
     
  0.681
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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