STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3234Uncharacterized protein; Predicted nucleotidyltransferase (216 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
   
 
 0.578
XCC2318
annotation not available
  
     0.575
pilO
Tfp pilus assembly protein PilO
 
     0.491
pilN
Tfp pilus assembly protein PilN
 
     0.488
XCC2608
Predicted membrane protein
  
     0.471
XCC1122
annotation not available
  
     0.456
XCC0526
Uncharacterized protein; Chromosome segregation ATPases
 
     0.452
pilP
Tfp pilus assembly protein PilP
 
     0.450
XCC3509
Uncharacterized protein; Predicted transcriptional regulator
  
     0.434
XCC2160
annotation not available
  
     0.434
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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