STRINGSTRING
pilN protein (Xanthomonas campestris campestris) - STRING interaction network
"pilN" - Tfp pilus assembly protein PilN in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilNTfp pilus assembly protein PilN (259 aa)    
Predicted Functional Partners:
pilO
Tfp pilus assembly protein PilO (221 aa)
 
 
  0.999
pilM
Tfp pilus assembly protein ATPase PilM (360 aa)
 
 
  0.997
pilP
Tfp pilus assembly protein PilP (177 aa)
 
 
  0.997
CAP50306.1
Type II secretory pathway, component HofQ (626 aa)
 
 
  0.993
XCC3750
Uncharacterized protein containing LysM domain (402 aa)
   
      0.888
pilT
Twitching motility protein; Tfp pilus assembly protein pilus retraction ATPase PilT (345 aa)
 
   
  0.879
CAP50436.1
Type II secretory pathway, component PulF (419 aa)
 
 
  0.847
CAP51022.1
Unnamed protein product (136 aa)
 
   
  0.814
pilD
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (287 aa)
 
   
  0.809
pilZ
Type IV fimbriae assembly protein; Tfp pilus assembly protein PilZ (117 aa)
   
   
  0.795
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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