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CAP50306.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP50306.1" - Type II secretory pathway, component HofQ in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP50306.1Type II secretory pathway, component HofQ (626 aa)    
Predicted Functional Partners:
pilP
Tfp pilus assembly protein PilP (177 aa)
 
 
  0.995
pilN
Tfp pilus assembly protein PilN (259 aa)
 
 
  0.993
pilO
Tfp pilus assembly protein PilO (221 aa)
 
 
  0.991
pilM
Tfp pilus assembly protein ATPase PilM (360 aa)
 
 
  0.991
CAP50436.1
Type II secretory pathway, component PulF (419 aa)
 
 
  0.938
pilA
Fimbrial protein precursor; Tfp pilus assembly protein, major pilin PilA (137 aa)
 
   
  0.840
pilB
Pilus biogenesis protein; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB (577 aa)
 
 
  0.822
pilT
Twitching motility protein; Tfp pilus assembly protein pilus retraction ATPase PilT (345 aa)
 
   
  0.821
XCC3750
Uncharacterized protein containing LysM domain (402 aa)
   
      0.820
pefL
Type II secretion system protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (373 aa)
 
 
  0.799
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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