STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctA2Proton glutamate symport protein; Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family (426 aa)    
Predicted Functional Partners:
kgtP
Dicarboxylate transport protein; Permeases of the major facilitator superfamily
  
  
 0.730
mgtE2
Magnesium transporter MgtE; Acts as a magnesium transporter
 
   
 0.688
mgtE1
Magnesium transporter MgtE; Acts as a magnesium transporter
 
   
 0.648
gabP
Amino acid transporter; Gamma-aminobutyrate permease and related permeases
      
 0.633
citH
Mg++ citrate complex transporter; H+/citrate symporter
  
  
 0.610
sulP
Sulfate permease and related transporters (MFS superfamily)
  
  
 0.603
XCC2360
Signal transduction histidine kinase
     
 0.582
maeB
Malic enzyme
  
  
 0.540
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
       0.491
egl1
Cellulase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family
      
 0.487
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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