STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3208annotation not available (392 aa)    
Predicted Functional Partners:
XCC3209
Outer membrane receptor proteins mostly Fe transport
 
     0.880
XCC1041
Outer membrane receptor proteins, mostly Fe transport
  
     0.671
appA
annotation not available
 
     0.601
XCC3207
Uncharacterized protein; Acetyl-CoA hydrolase
       0.529
XCC2595
annotation not available
  
     0.477
gaa
Glutaryl-7-ACA acylase; Predicted acyl esterases
  
     0.476
XCC0759
Outer membrane receptor proteins mostly Fe transport
  
     0.461
XCC2830
annotation not available
 
     0.449
XCC3823
Disulphide-isomerase; Thiol-disulfide isomerase and thioredoxins
  
   
 0.438
XCC1042
Glycerophosphoryl diester phosphodiesterase
  
     0.424
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (14%) [HD]