STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3203Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family (185 aa)    
Predicted Functional Partners:
modB
ABC-type molybdate transport system permease component
       0.692
modC
Molybdate-transporting ATPase; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family
       0.688
modA
Molybdate-binding periplasmic protein; ABC-type molybdate transport system periplasmic component
       0.686
rpmE
Ribosomal protein L31
     
 0.612
rpmJ
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family
      
 0.588
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
      
 0.588
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family
      
 0.588
rpmG
Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family
      
 0.584
XCC3207
Uncharacterized protein; Acetyl-CoA hydrolase
       0.583
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
      
 0.501
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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