STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3191Uncharacterized protein (156 aa)    
Predicted Functional Partners:
XCC4126
annotation not available
  
     0.734
XCC2436
Uncharacterized protein
  
     0.679
ugcG
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis
  
     0.650
XCC3981
annotation not available
  
     0.635
plaS
Accessory protein; FOG: Ankyrin repeat
  
     0.620
XCC3075
annotation not available
  
     0.612
XCC0680
Uncharacterized protein; Hydrolyses the glycosidic bond between a carbohydrate and a second moiety
  
     0.611
XCC2560
annotation not available
  
     0.606
oma
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
    
 
 0.601
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
   
 
 0.598
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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