STRINGSTRING
XCC3190 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3190" - Predicted membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3190Predicted membrane protein (910 aa)    
Predicted Functional Partners:
XCC3189
Uncharacterized protein (454 aa)
        0.977
XCC3753
Tfp pilus assembly protein major pilin PilA (246 aa)
   
          0.549
XCC1496
annotation not available (177 aa)
   
          0.515
XCC3191
Uncharacterized protein (156 aa)
              0.490
XCC2631
annotation not available (266 aa)
   
          0.481
idgB
Indigoidine synthesis like protein; Predicted phosphatases (215 aa)
              0.463
XCC1352
Predicted membrane protein (303 aa)
   
          0.449
XCC2506
Uncharacterized protein conserved in bacteria (375 aa)
   
          0.440
dauE
Aklaviketone reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (257 aa)
   
          0.430
pgk
3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family (391 aa)
              0.418
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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