STRINGSTRING
alsT protein (Xanthomonas campestris campestris) - STRING interaction network
"alsT" - Sodium/proton-dependent alanine carrier protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alsTSodium/proton-dependent alanine carrier protein; Na+/alanine symporter (497 aa)    
Predicted Functional Partners:
rlmB
tRNA/rRNA methyltransferase; rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family (300 aa)
              0.847
estB
Carboxylic ester hydrolase; Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family (502 aa)
              0.845
prpC
Citrate synthase; Belongs to the citrate synthase family (384 aa)
     
   
  0.844
gltA
Citrate synthase; Belongs to the citrate synthase family (452 aa)
     
   
  0.844
XCC3167
Acetyltransferases including N-acetylases of ribosomal proteins (192 aa)
              0.571
pepN
Aminopeptidase N (891 aa)
              0.547
icd2
Monomeric isocitrate dehydrogenase (743 aa)
     
        0.457
XCC4076
Two-component system sensor protein; Na+/proline symporter (1147 aa)
   
   
  0.442
maeB
Malic enzyme (775 aa)
   
   
  0.409
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (16%) [HD]