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rlmB protein (Xanthomonas campestris campestris) - STRING interaction network
"rlmB" - tRNA/rRNA methyltransferase in Xanthomonas campestris campestris
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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rlmBtRNA/rRNA methyltransferase; rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family (300 aa)    
Predicted Functional Partners:
estB
Carboxylic ester hydrolase; Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family (502 aa)
              0.855
alsT
Sodium/proton-dependent alanine carrier protein; Na+/alanine symporter (497 aa)
              0.847
nusG
Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination (185 aa)
   
   
  0.764
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (101 aa)
   
   
  0.762
rpmD
Ribosomal protein L30/L7E (63 aa)
     
   
  0.748
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex (72 aa)
     
   
  0.743
cysU
ABC-type sulfate transport system permease component (286 aa)
           
  0.713
comEA
DNA uptake protein and related DNA-binding proteins (110 aa)
         
  0.706
prmC
Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (283 aa)
 
 
  0.636
nnrE
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (495 aa)
   
 
  0.591
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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