STRINGSTRING
XCC3162 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3162" - Glycosyl hydrolase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3162Glycosyl hydrolase; Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family (1154 aa)    
Predicted Functional Partners:
susB
annotation not available (654 aa)
 
          0.762
XCC3559
Predicted membrane protein (155 aa)
   
          0.686
XCC3161
Outer membrane receptor proteins mostly Fe transport (978 aa)
 
          0.680
fucA2
Uncharacterized protein; Alpha-L-fucosidase (642 aa)
 
     
  0.636
xynB
annotation not available (521 aa)
 
     
  0.620
XCC2404
Uncharacterized protein; Beta-galactosidase (545 aa)
 
     
  0.586
XCC1081
Uncharacterized protein; Putative alpha-12-mannosidase (782 aa)
 
          0.563
XCC1754
Uncharacterized protein; Beta-galactosidase (579 aa)
 
   
  0.553
nahA
N-acetyl-beta-hexosaminidase (827 aa)
 
   
  0.545
XCC0123
Uncharacterized protein (1283 aa)
 
          0.534
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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