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XCC3161 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3161" - Outer membrane receptor proteins mostly Fe transport in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3161Outer membrane receptor proteins mostly Fe transport (978 aa)    
Predicted Functional Partners:
XCC2927
Periplasmic protein TonB links inner and outer membranes (291 aa)
 
 
  0.897
tonB
Periplasmic protein TonB, links inner and outer membranes (224 aa)
   
 
  0.883
tonB1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) (223 aa)
   
 
  0.814
XCC1430
annotation not available (874 aa)
   
          0.746
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (354 aa)
           
  0.744
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
   
          0.711
XCC0114
Transcriptional regulator; FOG- WD40 repeat (1172 aa)
   
     
  0.709
CAP52000.1
Phage-related minor tail protein (1340 aa)
   
          0.709
xcsL
Type II secretory pathway component PulL (354 aa)
   
          0.706
CAP52472.1
Type V secretory pathway, adhesin AidA (1331 aa)
   
          0.693
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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