STRINGSTRING
XCC1613 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1613" - Integrase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1613Integrase; Belongs to the ’phage’ integrase family (482 aa)    
Predicted Functional Partners:
XCC0456
Opacity protein and related surface antigens (279 aa)
   
          0.647
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins (576 aa)
   
     
  0.618
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
   
          0.617
XCC3161
Outer membrane receptor proteins mostly Fe transport (978 aa)
   
     
  0.595
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase (762 aa)
   
   
  0.586
wrbA
Tryptophan repressor binding protein; Multimeric flavodoxin WrbA (191 aa)
           
  0.581
XCC1115
annotation not available (643 aa)
   
          0.581
XCC1350
annotation not available (505 aa)
   
          0.578
CAP51040.1
Putative peptidoglycan-binding domain-containing protein (441 aa)
   
          0.558
wxcD
wxcD; Glycosyltransferase (581 aa)
   
          0.553
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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