STRINGSTRING
XCC3086 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3086" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3086annotation not available (168 aa)    
Predicted Functional Partners:
XCC0048
Uncharacterized protein (218 aa)
 
          0.903
CAP49380.1
Unknown (158 aa)
 
          0.886
XCC3085
Uncharacterized protein conserved in bacteria (139 aa)
 
          0.885
XCC3087
Polyphenol oxidase; Belongs to the multicopper oxidase YfiH/RL5 family (266 aa)
              0.857
rluD
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA (259 aa)
              0.857
CAP50455.1
annotation not available (42 aa)
              0.801
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (293 aa)
              0.666
XCC1169
annotation not available (774 aa)
   
          0.610
XCC0546
annotation not available (270 aa)
   
        0.567
XCC0588
annotation not available (111 aa)
   
          0.559
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (11%) [HD]