STRINGSTRING
XCC3078 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3078" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3078annotation not available (157 aa)    
Predicted Functional Partners:
XCC3076
Uncharacterized protein; Permeases (549 aa)
 
          0.820
XCC3077
annotation not available (290 aa)
              0.770
XCC3079
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport (811 aa)
 
          0.646
XCC3799
annotation not available (125 aa)
   
          0.627
XCC1887
Uncharacterized protein; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) (102 aa)
   
        0.616
oma
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (818 aa)
       
 
  0.601
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (293 aa)
     
 
  0.598
XCC1742
annotation not available (172 aa)
       
 
  0.588
XCC3075
annotation not available (388 aa)
              0.541
mxaF2
Glucose dehydrogenase (575 aa)
       
 
  0.536
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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