STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3077annotation not available (290 aa)    
Predicted Functional Partners:
XCC2424
annotation not available
  
     0.776
XCC3078
annotation not available
       0.770
CAP49830.1
Uncharacterized conserved protein
  
     0.714
XCC0572
annotation not available
  
     0.699
xcc-b100_1236
Acetyltransferases, including N-acetylases of ribosomal proteins
  
     0.693
XCC4137
annotation not available
  
     0.686
XCC3284
annotation not available
  
     0.682
XCC3075
annotation not available
 
     0.665
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins
  
     0.654
XCC0372
Hydrolase; Lysophospholipase
  
     0.644
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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