STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3076Uncharacterized protein; Permeases (549 aa)    
Predicted Functional Partners:
XCC3075
annotation not available
       0.860
XCC3078
annotation not available
 
     0.820
XCC3799
annotation not available
  
     0.698
XCC3077
annotation not available
       0.589
acpP1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family
   
 
 0.523
acpP2
Acyl carrier protein
   
 
 0.523
XCC2160
annotation not available
  
     0.463
tyrB
Aminotransferase; Aspartate/tyrosine/aromatic aminotransferase
 
   
 0.455
XCC1836
annotation not available
  
     0.450
XCC3079
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport
 
     0.437
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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