STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3069Uncharacterized protein (297 aa)    
Predicted Functional Partners:
CAP50473.1
annotation not available
       0.697
metY
Homocysteine synthase PA5025 (Imported); O-acetylhomoserine sulfhydrylase
       0.697
XCC3979
annotation not available
  
     0.583
XCC1052
annotation not available
  
     0.553
XCC3284
annotation not available
  
     0.546
clpB
Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK (By similarity); Belongs to the ClpA/ClpB family
       0.530
XCC1480
Toxin secretion ABC transporter ATP-binding protein; ABC-type multidrug transport system, ATPase and permease components
     
 0.493
XCC2011
Exopolysaccharide biosynthesis protein; Predicted acyltransferase
  
     0.486
XCC1115
annotation not available
  
     0.459
fecA2
Outer membrane receptor proteins, mostly Fe transport
  
     0.451
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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