STRINGSTRING
yceE protein (Xanthomonas campestris campestris) - STRING interaction network
"yceE" - Transport protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yceETransport protein; Permeases of the major facilitator superfamily (392 aa)    
Predicted Functional Partners:
iucA
Iron transporter; Siderophore synthetase component (589 aa)
          0.981
XCC3051
annotation not available (408 aa)
 
          0.972
XCC3052
Uncharacterized protein; Siderophore synthetase component (610 aa)
 
          0.971
XCC3055
Diaminopimelate decarboxylase (427 aa)
 
 
      0.940
fecA1
Citrate-dependent iron transporter; Outer membrane receptor for Fe3+-dicitrate (709 aa)
 
          0.853
mphE
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family (253 aa)
 
          0.718
XCC4179
annotation not available (371 aa)
   
          0.522
XCC2401
annotation not available (784 aa)
   
        0.457
XCC1668
annotation not available (448 aa)
   
          0.422
XCC1554
Predicted membrane protein (731 aa)
   
          0.403
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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