STRINGSTRING
bioI protein (Xanthomonas campestris campestris) - STRING interaction network
"bioI" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bioIannotation not available (431 aa)    
Predicted Functional Partners:
vanB
Vanillate O-demethylase oxidoreductase; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 (319 aa)
     
  0.791
CAP52458.1
NADPH-dependent glutamate synthase beta chain and related oxidoreductases (261 aa)
   
 
  0.695
pobB
Phenoxybenzoate dioxygenase beta subunit; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 (372 aa)
     
  0.594
XCC2267
annotation not available (229 aa)
 
 
  0.560
entF
ATP-dependent serine activating enzyme; Non-ribosomal peptide synthetase modules and related proteins (1326 aa)
   
 
  0.558
XCC2912
Cytochrome P450 hydroxylase; Unnamed protein product; Belongs to the cytochrome P450 family (386 aa)
   
          0.522
XCC0092
annotation not available (265 aa)
   
 
  0.495
ugt
Glucosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase (444 aa)
     
      0.492
alg2
Glycosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase (414 aa)
     
      0.492
XCC1211
Uncharacterized protein; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (269 aa)
   
 
  0.434
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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