STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3036Outer membrane receptor proteins mostly Fe transport (802 aa)    
Predicted Functional Partners:
CAP51828.1
annotation not available
  
     0.615
fecR
Fe2+-dicitrate sensor, membrane component
 
 
 0.601
XCC1179
Outer membrane receptor proteins mostly Fe transport
  
    0.600
ggpS
Trehalose-6-phosphate synthase
       0.493
ycaD
Transmembrane transport protein; Permeases of the major facilitator superfamily
       0.493
XCC2179
Two-component system sensor protein; Predicted periplasmic ligand-binding sensor domain
  
     0.484
virB1
Type IV secretion system lytic murein transglycosylase component VirB1; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
  
     0.476
CAP50226.1
Outer membrane receptor for ferrienterochelin and colicins
  
  
 0.474
virB6_1
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components
  
     0.469
virB6_2
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components
  
     0.452
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (9%) [HD]