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ggpS protein (Xanthomonas campestris campestris) - STRING interaction network
"ggpS" - Trehalose-6-phosphate synthase in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggpSTrehalose-6-phosphate synthase (785 aa)    
Predicted Functional Partners:
otsB
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (252 aa)
   
  0.987
ycaD
Transmembrane transport protein; Permeases of the major facilitator superfamily (413 aa)
              0.859
treS
Trehalose synthase; Glycosidases (1116 aa)
   
   
  0.748
cga
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases (592 aa)
 
     
  0.737
XCC1078
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases (601 aa)
 
     
  0.656
XCC2291
Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain (689 aa)
 
     
  0.653
XCC3994
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases (599 aa)
 
     
  0.634
XCC2933
Glycosyl transferase; Unnamed protein product (700 aa)
     
 
  0.585
glgY
Maltooligosyl trehalose synthase (872 aa)
   
   
  0.580
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (322 aa)
   
   
  0.570
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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