STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3032annotation not available (215 aa)    
Predicted Functional Partners:
XCC3033
annotation not available
       0.845
XCC3372
Uncharacterized protein; Imidazolonepropionase and related amidohydrolases
  
     0.619
XCC3371
Uncharacterized protein; Imidazolonepropionase and related amidohydrolases
  
     0.618
XCC4059
annotation not available
  
     0.588
XCC2867
Outer membrane receptor proteins mostly Fe transport
  
     0.572
XCC0272
Uncharacterized protein; Predicted methyltransferase
  
     0.530
XCC3158
Predicted aminopeptidases
  
     0.511
XCC0024
Uncharacterized protein; Predicted aminopeptidases
 
     0.507
XCC2632
annotation not available
  
     0.503
XCC3961
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
  
     0.498
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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