STRINGSTRING
XCC3031 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3031" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3031annotation not available (256 aa)    
Predicted Functional Partners:
XCC4130
annotation not available (324 aa)
   
          0.740
XCC3897
annotation not available (259 aa)
   
          0.718
XCC3764
annotation not available (352 aa)
   
          0.687
XCC3936
annotation not available (261 aa)
   
          0.684
XCC1144
annotation not available (168 aa)
   
          0.683
XCC0986
annotation not available (218 aa)
   
          0.664
XCC0197
Uncharacterized enzyme of heme biosynthesis (325 aa)
   
          0.658
aspS
Aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction- L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily (588 aa)
              0.653
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
          0.643
XCC0767
annotation not available (81 aa)
   
          0.637
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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