STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolAannotation not available (345 aa)    
Predicted Functional Partners:
tolR
TolR protein; Biopolymer transport protein
  
 
 0.976
tolQ
TolQ protein; Biopolymer transport proteins
  
 
 0.938
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins
 
 
 
 0.845
cpoB
Cell division coordinator CpoB; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
 
   0.832
hemY
Porphyrin biosynthesis protein; Uncharacterized enzyme of heme biosynthesis
  
    0.735
XCC3022
Uncharacterized protein; Predicted thioesterase
  
  
 0.722
XCC0986
annotation not available
  
 
   0.675
XCC1585
Uncharacterized protein; FOG: FHA domain
  
    0.649
XCC1144
annotation not available
  
     0.649
XCC3900
annotation not available
  
     0.644
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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