STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2949Response regulator; FOG: CheY-like receiver (134 aa)    
Predicted Functional Partners:
XCC1185
annotation not available
 
 
 0.621
XCC2948
annotation not available
       0.614
XCC1652
Histidine kinase; FOG: PAS/PAC domain
 
 
 
 0.580
XCC1186
Two-component system sensor protein; Signal transduction histidine kinase nitrogen specific
 
 
 0.552
XCC2360
Signal transduction histidine kinase
 
  
 0.512
XCC2054
Histidine kinase/response regulator hybrid protein; Signal transduction histidine kinase
 
 
   0.431
recQ
Superfamily II DNA helicase
   
   0.429
XCC0483
Two-component system sensor protein; Signal transduction histidine kinase
 
 
 0.415
XCC1276
Uncharacterized protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  
   0.410
XCC2291
Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain
  
 
 0.405
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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