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pqqB protein (Xanthomonas campestris campestris) - STRING interaction network
"pqqB" - Coenzyme PQQ synthesis protein B in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqqBCoenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm (299 aa)    
Predicted Functional Partners:
pqqC
Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ (250 aa)
   
  0.998
pqqE
Coenzyme PQQ synthesis protein E; Predicted Fe-S oxidoreductases; Belongs to the radical SAM superfamily. PqqE family (376 aa)
 
   
  0.997
pqqD
Coenzyme PQQ synthesis protein D; Pyrroloquinoline quinone (PQQ) biosynthesis (92 aa)
 
   
  0.994
pqqA
annotation not available (26 aa)
         
  0.889
mxaF1
Methanol dehydrogenase heavy chain; Glucose dehydrogenase (672 aa)
 
     
  0.808
XCC3476
Surface antigen protein (348 aa)
 
          0.670
XCC2941
annotation not available (170 aa)
              0.657
XCC1575
Glucose dehydrogenase (820 aa)
 
     
  0.501
XCC3083
Glucose dehydrogenase (824 aa)
 
     
  0.499
mxaF2
Glucose dehydrogenase (575 aa)
   
          0.466
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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