STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2935Uncharacterized protein; Type V secretory pathway, adhesin AidA (504 aa)    
Predicted Functional Partners:
XCC0986
annotation not available
  
 
   0.782
cheB1
Protein-glutamate methylesterase; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
  
     0.777
xpsN
General secretion pathway protein N; Involved in a general secretion pathway (GSP) for the export of proteins
  
     0.771
XCC2621
annotation not available
  
     0.770
XCC3764
annotation not available
  
     0.767
XCC3763
annotation not available
  
     0.765
XCC3794
annotation not available
  
     0.764
XCC0274
annotation not available
  
     0.755
XCC1144
annotation not available
  
     0.754
XCC3936
annotation not available
  
     0.743
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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