STRINGSTRING
CAP50572.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP50572.1" - Transposase and inactivated derivatives in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP50572.1Transposase and inactivated derivatives (126 aa)    
Predicted Functional Partners:
CAP50571.1
Transposase and inactivated derivatives (172 aa)
          0.965
XCC1177
Transposase and inactivated derivatives (158 aa)
 
          0.786
XCC1636
Transposase and inactivated derivatives (172 aa)
 
          0.784
CAP52202.1
Transposase and inactivated derivatives (172 aa)
 
          0.784
CAP52107.1
Transposase and inactivated derivatives (172 aa)
 
          0.783
CAP51710.1
Transposase and inactivated derivatives (172 aa)
 
          0.783
CAP50540.1
Transposase and inactivated derivatives (172 aa)
 
          0.784
CAP49897.1
Transposase and inactivated derivatives, IS5 family (172 aa)
 
          0.784
CAP49508.1
Transposase and inactivated derivatives, IS5 family (172 aa)
 
          0.784
XCC0136
Transposase and inactivated derivatives (172 aa)
 
          0.783
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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