STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilGType IV pilus response regulator (133 aa)    
Predicted Functional Partners:
pilI
Pilus biogenesis protein; Type IV pili chemotaxis signal transduction protein
 
 
  0.990
pilJ
Pilus biogenesis protein; Type IV pili methyl-accepting chemotaxis transducer protein
 
 0.986
pilL
Chemotaxis protein histidine kinase and related kinases
 
0.977
cheA3
Chemotaxis protein histidine kinase and related kinases
 
 
 0.924
XCC2924
PilH protein; FOG: CheY-like receiver
 
   
0.900
XCC2919
Chemotaxis signal transduction protein
 
  
 0.842
CAP51797.1
annotation not available
     
  0.800
cheA2
Chemotaxis protein histidine kinase and related kinases
 
 
 0.793
XCC2360
Signal transduction histidine kinase
 
 
0.789
XCC3512
Two-component system regulatory protein; Response regulator of the LytR/AlgR family
  
   
 0.784
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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