STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2912Cytochrome P450 hydroxylase; Unnamed protein product; Belongs to the cytochrome P450 family (386 aa)    
Predicted Functional Partners:
XCC2911
annotation not available
 
     0.876
XCC2910
annotation not available
       0.845
entF
ATP-dependent serine activating enzyme; Non-ribosomal peptide synthetase modules and related proteins
 
 
 0.609
ugt
Glucosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase
 
 
   0.567
CAP52458.1
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
  
 
 0.532
bioI
annotation not available
  
     0.522
XCC0092
annotation not available
  
 
 0.495
alg2
Glycosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase
   
   0.492
XCC2267
annotation not available
  
 
 0.491
cysJ
Sulfite reductase [NADPH] flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component
  
 
 0.464
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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