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nanH protein (Xanthomonas campestris campestris) - STRING interaction network
"nanH" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanHUncharacterized protein; Predicted neuraminidase (sialidase) (355 aa)    
Predicted Functional Partners:
fucA2
Uncharacterized protein; Alpha-L-fucosidase (642 aa)
   
  0.909
mphE
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family (253 aa)
 
        0.592
dapA2
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family (302 aa)
 
   
  0.537
XCC2397
Peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases (806 aa)
   
          0.534
XCC4186
Leucine-rich repeat (LRR) protein (610 aa)
 
 
 
  0.529
fucA1
Alpha-L-fucosidase (561 aa)
 
   
  0.473
pglA2
Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family (556 aa)
 
     
  0.459
XCC2405
Peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases (778 aa)
   
          0.459
XCC2565
Leucine-rich repeat (LRR) protein (536 aa)
     
 
  0.452
dapA1
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (302 aa)
   
   
  0.449
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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