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hsdR protein (Xanthomonas campestris campestris) - STRING interaction network
"hsdR" - Type I restriction enzyme R Protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdRType I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification (1096 aa)    
Predicted Functional Partners:
hsdS
Type I restriction enzyme (Specificity chain) homolog; Restriction endonuclease S subunits (415 aa)
 
   
  0.976
XCC2906
Uncharacterized protein; Predicted metal-dependent hydrolase (248 aa)
 
     
  0.964
hsdM
Type I restriction-modification system methyltransferase subunit (502 aa)
 
   
  0.961
CAP52645.1
Type I restriction-modification system methyltransferase subunit (728 aa)
 
   
  0.931
XCC2901
annotation not available (198 aa)
 
   
  0.908
CAP52643.1
Restriction endonuclease S subunits (438 aa)
 
   
  0.825
CAP51796.1
Chromosome segregation ATPases (595 aa)
   
        0.682
XCC0525
ATP-dependent DNA helicase; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (438 aa)
 
        0.672
CAP52644.1
Virulence protein (360 aa)
 
          0.642
XCC2903
annotation not available (284 aa)
 
          0.640
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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