STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdMType I restriction-modification system methyltransferase subunit (502 aa)    
Predicted Functional Partners:
XCC2901
annotation not available
 
 
 0.983
hsdR
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification
 
  
 0.961
hsdS
Type I restriction enzyme (Specificity chain) homolog; Restriction endonuclease S subunits
 
 
 0.953
CAP52642.1
Type I site-specific restriction-modification system R (restriction) subunit and related helicases
 
  
 0.932
CAP52643.1
Restriction endonuclease S subunits
 
 0.915
XCC2903
annotation not available
 
     0.891
XCC2906
Uncharacterized protein; Predicted metal-dependent hydrolase
 
     0.865
CAP52644.1
Virulence protein
 
     0.752
XCC2900
annotation not available
       0.537
XCC0525
ATP-dependent DNA helicase; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
 
    0.531
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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