STRINGSTRING
bmnA protein (Xanthomonas campestris campestris) - STRING interaction network
"bmnA" - Beta-mannosidase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmnABeta-mannosidase; Beta-galactosidase/beta-glucuronidase (893 aa)    
Predicted Functional Partners:
nahA
N-acetyl-beta-hexosaminidase (827 aa)
 
   
  0.955
fucA1
Alpha-L-fucosidase (561 aa)
 
     
  0.936
bga2
Beta-galactosidase (680 aa)
 
   
  0.855
chiA
Uncharacterized protein; Predicted glycosyl hydrolase (353 aa)
 
     
  0.799
XCC2892
Glucan 1,4-beta-glucosidase; Beta-glucosidase-related glycosidases (888 aa)
 
     
  0.749
XCC2894
Uncharacterized protein; Putative alpha-1,2-mannosidase (781 aa)
 
          0.617
aspG
Asparaginase (354 aa)
   
   
  0.593
XCC2893
Uncharacterized protein (505 aa)
 
        0.557
XCC0127
Transposase and inactivated derivatives IS5 family (326 aa)
           
  0.489
XCC0128
Transposase and inactivated derivatives (404 aa)
           
  0.489
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (27%) [HD]