STRINGSTRING
fucA1 protein (Xanthomonas campestris campestris) - STRING interaction network
"fucA1" - Alpha-L-fucosidase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucA1Alpha-L-fucosidase (561 aa)    
Predicted Functional Partners:
chiA
Uncharacterized protein; Predicted glycosyl hydrolase (353 aa)
 
     
  0.953
bmnA
Beta-mannosidase; Beta-galactosidase/beta-glucuronidase (893 aa)
 
     
  0.936
bga2
Beta-galactosidase (680 aa)
 
   
  0.922
fucA2
Uncharacterized protein; Alpha-L-fucosidase (642 aa)
   
   
    0.909
XCC1756
Uncharacterized protein (790 aa)
 
   
    0.885
nahA
N-acetyl-beta-hexosaminidase (827 aa)
 
   
  0.811
bga3
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family (855 aa)
 
     
  0.693
XCC2893
Uncharacterized protein (505 aa)
 
     
  0.658
XCC3148
Lipase/esterase; Phospholipase/lecithinase/hemolysin (605 aa)
   
     
  0.634
XCC2894
Uncharacterized protein; Putative alpha-1,2-mannosidase (781 aa)
 
     
  0.612
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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