STRINGSTRING
XCC2880 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2880" - UPF0060 membrane protein XCC2880 in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2880UPF0060 membrane protein XCC2880 (111 aa)    
Predicted Functional Partners:
XCC2881
Uncharacterized protein; Predicted pyrophosphatase (274 aa)
              0.855
cysQ
Sulfite synthesis pathway protein; 3-Phosphoadenosine 5-phosphosulfate (PAPS) 3-phosphatase (261 aa)
              0.729
nudE
ADP compounds hydrolase; ADP-ribose pyrophosphatase; Nicotinamide mononucleotide adenylyltransferase (185 aa)
              0.713
XCC2884
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (472 aa)
              0.529
XCC2885
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (244 aa)
              0.529
XCC2878
Membrane protein implicated in regulation of membrane protease activity (144 aa)
              0.514
XCC2879
Uncharacterized protein; Membrane protease subunits, stomatin/prohibitin homologs (321 aa)
              0.514
XCC1325
Uncharacterized protein; Putative translation initiation inhibitor yjgF family (115 aa)
           
  0.475
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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