STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2868Transcriptional regulator (202 aa)    
Predicted Functional Partners:
XCC2869
Uncharacterized protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
 
    0.761
fadE1
Acyl-CoA dehydrogenases
     
 0.722
XCC2197
annotation not available
  
     0.533
XCC2843
Uncharacterized protein
  
     0.452
XCC3383
annotation not available
  
     0.449
XCC3509
Uncharacterized protein; Predicted transcriptional regulator
  
     0.447
XCC2739
annotation not available
  
     0.444
uptF
annotation not available
  
    0.429
CAP52111.1
annotation not available
  
     0.416
CAP52112.1
annotation not available
  
     0.416
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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