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emrA protein (Xanthomonas campestris campestris) - STRING interaction network
"emrA" - MFS transporter in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrAMFS transporter; Permeases of the major facilitator superfamily (473 aa)    
Predicted Functional Partners:
opdE
Transcriptional regulator; Arabinose efflux permease (398 aa)
   
   
  0.656
mtrC
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (412 aa)
 
 
  0.605
pcaF
Beta-ketoadipyl CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (402 aa)
     
   
  0.593
fusE
Fusaric acid resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (311 aa)
 
 
 
  0.582
mexF
Cation/multidrug efflux pump (1075 aa)
     
 
  0.551
sugE
SugE protein; Membrane transporters of cations and cationic drugs (104 aa)
           
  0.502
raxC
Outer membrane protein (457 aa)
           
  0.496
norM
Probable multidrug resistance protein NorM; Multidrug efflux pump (458 aa)
           
  0.446
CAP50661.1
annotation not available (85 aa)
              0.430
pmrA
Multidrug resistance efflux pump; Membrane-fusion protein (397 aa)
 
 
 
  0.420
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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