STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2834annotation not available (191 aa)    
Predicted Functional Partners:
XCC2833
Synthetase/amidase; Glutathionylspermidine synthase
 
   0.977
XCC2835
Predicted membrane protein
 
    0.956
XCC2836
annotation not available
 
     0.936
XCC2839
Uncharacterized protein conserved in bacteria
 
     0.914
XCC2838
Phage shock protein A (IM30) suppresses sigma54-dependent transcription
 
     0.891
XCC2837
Potassium channel related protein; Kef-type K+ transport systems predicted NAD-binding component
 
 
   0.879
gumL
GumL protein; Pyruvylation of the outer mannose of xanthan
  
     0.551
XCC4214
annotation not available
  
     0.529
uidR
Transcriptional regulator
  
     0.523
tlpC
Methyl-accepting chemotaxis protein
  
     0.501
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (5%) [HD]