STRINGSTRING
soxR protein (Xanthomonas campestris campestris) - STRING interaction network
"soxR" - Predicted transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxRPredicted transcriptional regulators (148 aa)    
Predicted Functional Partners:
XCC2830
annotation not available (94 aa)
            0.917
XCC0300
annotation not available (225 aa)
           
  0.711
oxyR
Transcriptional regulator (313 aa)
       
 
  0.706
XCC1481
Hydrogen peroxide-inducible genes activator protein; Transcriptional regulator (299 aa)
       
 
  0.705
XCC2832
MFS transporter; Permeases of the major facilitator superfamily (425 aa)
         
  0.587
dnaJ2
Curved DNA binding protein; DnaJ-class molecular chaperone with C-terminal Zn finger domain (302 aa)
   
 
  0.579
dnaJ1
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (376 aa)
   
 
  0.579
XCC0454
Uncharacterized protein; DnaJ-class molecular chaperone (109 aa)
   
 
  0.579
XCC1185
annotation not available (1046 aa)
     
 
  0.558
XCC2829
Aminopeptidase N (560 aa)
              0.546
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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