STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2829Aminopeptidase N (560 aa)    
Predicted Functional Partners:
XCC2830
annotation not available
     0.974
XCC3271
Oar protein; Outer membrane receptor proteins, mostly Fe transport
  
     0.561
soxR
Predicted transcriptional regulators
       0.546
pglA2
Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family
  
   
 0.496
ampC2
Beta-lactamase class C and other penicillin binding proteins
  
     0.480
gaa
Glutaryl-7-ACA acylase; Predicted acyl esterases
 
   
 0.468
aspG
Asparaginase
  
     0.463
ccmD
Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
  
     0.460
XCC3046
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport
  
     0.456
XCC2573
Oar protein; Outer membrane receptor for ferrienterochelin and colicins
  
     0.447
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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