STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2821annotation not available (306 aa)    
Predicted Functional Partners:
XCC2820
annotation not available
      0.960
avrBs2
Avirulence protein; Glycerophosphoryl diester phosphodiesterase,probable
  
     0.567
XCC2078
annotation not available
  
     0.557
XCC2360
Signal transduction histidine kinase
  
   
 0.544
XCC2403
annotation not available
  
     0.504
pglA2
Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family
  
   
 0.495
mxaF2
Glucose dehydrogenase
  
     0.488
XCC0735
annotation not available
  
     0.483
XCC0050
Outer membrane receptor proteins, mostly Fe transport
  
     0.458
XCC3758
annotation not available
 
     0.454
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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