STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2788Uncharacterized protein conserved in bacteria (387 aa)    
Predicted Functional Partners:
perM
Permease; Predicted permease
       0.898
XCC2786
Replication related protein; ATPase involved in DNA replication initiation; Belongs to the DnaA family. HdA subfamily
       0.898
XCC2792
annotation not available
 
     0.828
XCC2793
annotation not available
 
     0.811
XCC0013
Uncharacterized protein
  
     0.756
XCC0007
Uncharacterized protein; FOG: TPR repeat
  
     0.752
ilvM
Acetolactate synthase (isozyme II) small (regulatory) subunit
  
     0.749
purM
Phosphoribosylformylglycinamidine cyclo-ligase; Phosphoribosylaminoimidazole (AIR) synthetase
       0.741
XCC0936
annotation not available
  
     0.741
XCC3794
annotation not available
  
     0.740
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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